autoencoder cluster plot

Scatter plot showing embeddings for trained model.

Parameters

color: str Colour based on an obs value (available for citeseq autoencoder).


Web view

autoencoder_cluster_plot_screenshot autoencoder_cluster_plot_screenshot

Python equivalent

# For Citeseq see https://nuwa-genomics.github.io/Nuwa/reference/Create_CiteSeq_model/init_model.html#python-example

# For Solo see https://nuwa-genomics.github.io/Nuwa/reference/Create_Solo_model/init_model.html#python-example